Puedes iniciar instalando la versión de desarrollo de
sivirep desde GitHub con los siguientes comandos:
install.packages("pak")
pak::pak("epiverse-trace/sivirep")Después de la instalación de sivirep, puedes comenzar
importando el paquete a través del siguiente comando:
Enfermedades disponibles para su descarga
Puedes revisar las enfermedades y los años disponibles de forma libre utilizando:
lista_eventos <- list_events()
knitr::kable(lista_eventos)| enfermedad | aa | |
|---|---|---|
| 1 | Accidente Ofídico | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 2 | Agresiones Por Animales Potencialmente Transmisores De Rabia | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 3 | Anomalías Congénitas | 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 4 | Bajo Peso Al Nacer | 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 5 | Cáncer De La Mama Y Cuello Uterino | 2016, 2017, 2018, 2019, 2020, 2021 |
| 6 | Cáncer Infantil | 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 7 | Chagas | 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 8 | Chikunguya | 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 9 | Dengue | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 10 | Dengue Grave | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 11 | Esi - Irag (Vigilancia Centinela) | 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 12 | Evento Adverso Grave Posterior A La Vacunación | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 13 | Exposición A Flúor | 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019 |
| 14 | Fiebre Amarilla | 2007, 2008, 2009, 2013, 2016, 2018 |
| 15 | Fiebre Tifoidea Y Paratifoidea | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 16 | Hepatitis A | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 17 | Hepatitis B, C Y Coinfección Hepatitis B Y Delta | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 18 | Hepatitis C | 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 19 | Hipotiroidismo Congénito | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 20 | Infección Respiratoria Aguda Grave Irag Inusitada | 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 67 | Intento De Suicidio | |
| 21 | Intoxicación Por Gases | 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 22 | Intoxicación Por Medicamentos | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 23 | Intoxicación Por Metales Pesados | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 24 | Intoxicación Por Metanol | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 25 | Intoxicación Por Otras Sustancias Químicas | 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 26 | Intoxicación Por Plaguicidas | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 27 | Intoxicación Por Solventes | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 28 | Intoxicación Por Sustancias Psicoactivas | 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 29 | Leishmaniasis Cutánea | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 30 | Leishmaniasis Mucosa | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 31 | Leishmaniasis Visceral | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 32 | Lepra | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 33 | Leptospirosis | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 34 | Lesiones Por Pólvora Y Explosivos | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014 |
| 35 | Leucemia Aguda Pediátrica Linfoide | 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 36 | Leucemia Aguda Pediátrica Mieloide | 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 66 | Malaria | |
| 37 | Malaria Asociada (Formas Mixtas) | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 38 | Malaria Complicada | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 39 | Malaria Falciparum | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 40 | Malaria Vivax | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 41 | Meningitis Meningocócica | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 42 | Meningitis Por Haemophilus Influenzae | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 43 | Meningitis Por Neumococo | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 44 | Meningitis Tuberculosa | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 45 | Morbilidad Por Eda | 2013, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 46 | Morbilidad Por Ira | 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 47 | Mortalidad Materna | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 48 | Mortalidad Perinatal Y Neonatal Tardía | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 49 | Mortalidad Por Dengue | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 50 | Mortalidad Por Desnutrición | 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 51 | Mortalidad Por Eda 0-4 Años | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 52 | Mortalidad Por Ira | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 53 | Mortalidad Por Malaria | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 54 | Parotiditis | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 55 | Rabia Humana | 2007, 2008, 2009, 2010, 2012, 2015, 2016, 2017, 2020 |
| 56 | Sarampión | 2011, 2012, 2013, 2015, 2018, 2019, 2020 |
| 57 | Tétanos Accidental | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 58 | Tétanos Neonatal | 2007, 2008, 2009, 2010, 2012, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 59 | Tos Ferina | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 60 | Tracoma | 2017, 2018, 2019, 2022 |
| 61 | Tuberculosis Extra Pulmonar | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 62 | Tuberculosis Farmacorresistente | 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 63 | Tuberculosis Pulmonar | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 64 | Varicela Individual | 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 65 | Vigilancia En Salud Pública De La Violencia De Género E Intrafamiliar | 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 |
| 68 | Zika |
Reporte automatizado
Actualmente, sivirep provee una plantilla de reporte
llamada Reporte Básico {sivirep}, la cual recibe los
siguientes parámetros de entrada: el nombre de la enfermedad, el año, el
nombre de departamento (opcional) y nombre del municipio (opcional) para
descargar los datos de la fuente de SIVIGILA.
Para hacer uso de la plantilla del reporte puedes seguir los siguientes pasos:
El reporte que obtendrás al utilizar la plantilla de
sivirep es este:
Si deseas generar el reporte en formato PDF debes instalar LateX. Puedes instalarlo siguiendo las instrucciones que se encuentran en R Markdown Cookbook:
Para obtener más detalles sobre plantillas y reportes genéricos de R Markdown, por favor consulta R Markdown templates.